| Protein ZmCA3P14 | |
|---|---|
|
ZmCA3P14 is a protein in the CCAAT-HAP3 family.
|
|
| Information | |
| TF Name: | ZmCA3P14 |
| Species: | Maize |
| TF Family: | CCAAT-HAP3 |
| Gene Name(Synonym): | ZmCADR9 |
| Uniprot ID: | A0A1D6PDQ1 |
Protein ZmCA3P14
ZmCA3P14 is a protein in the CCAAT-HAP3 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | |||
|---|---|---|---|
| CCAAT-Dr1 | NF-YB | PF00808 | |
| Zm00001eb025330_T001 |  | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d030150 | DAPseq |  |
sequence | fimo | position |
| Zm00001d030150 | DAPseq |  |
sequence | fimo | position |
| Zm00001d030150 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d030150 | PChIPseq |  |
sequence | fimo | position |
| Zm00001d030151 | DAPseq |  |
sequence | fimo | position |
| Zm00001d030151 | DAPseq |  |
sequence | fimo | position |
| Zm00001d030151 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d030151 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmCA3P14 is the regulator
Interactions where ZmCA3P14 is the target
Expand
Zm00001eb025330_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQECVSEFMASDKCVKERRKTINDDDIIWSLGTLG
FEEYVEPLKIYLNNYRERTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSLS
QISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDSVSYHESSVCRHCMVTVCGCH
IKRSQH
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| CCAAT-Dr1 |
|
| PF00808 |
|
| NF-YB |
|
| Hover here to show all domains | |
Nucleotide Sequence
Copy to clipboard
Expand
CTGGTGAACGGCCGGCGCCACCATG...
CTGGTGAACGGCCGGCGCCACCATGGCGGCGTCCAGGGTCTCGGCATGTCGGAGGTGGAGGCCAACGCCGGCGGCGGGGGCAAGGAGCAGGACCGATTCCTCCCTGTCGCCAACATCGGGCGCATCATGCGCCGCGCGGTGCTGGAGAACGGAAAGATCGCTAGGGACGCGAGGGAGTCCATCCAGGAGTGCGTCTCCGAGTTCATGGCGAGTGACAAGTGCGTCAAGGAGAGGCGAAAGACCATCAACGACGACGACATCATCTGGTCCTTGGGTACGCTCGGCTTCGAGGAATACGTTGAGCCCCTCAAGATCTACCTGAACAATTACCGGGAGAGGACTAAGTACAACAACATGGAGCCGGATGTTGTTGATTTCTTTGGGGAATGTATGAATAGTCCCCGAAATGGTCGTACTCCGCTTGCAAATGAGATATATGAGCAAATGGTTGCAGAGAAGGAAAGAGAGCTAGAAGAAGGAGAAGCACAAAAGTCACCCTCCAGGATTGTTGCTGATAGTCTCAGCCAGATCAGTCGCTCATCCACCTTCCTTCCAAACATTGGTGTCTGTTTGAGTGCTTCAAACCTTTGTGGTGGAACCTTTGTATGTTTGAACCTCTGTTGTGGAAGAACTAGTGTGCTGGAATTGTGTATGACTTGTGATGAGAATGTTGTGTATGATGGCTTTTCATTGTATTATGATTCTGTGAGCTATCATGAGAGCTCAGTGTGTCGTCACTGTATGGTCACTGTATGTGGGTGCCATATTAAACGATCCCAACATTAG
GRMZM5G809663_T01 from maize genome v3
Amino Acid Sequence
Copy to clipboard
MSEVEANAGGGGKEQDRFLPVANIGRIMRRAVLENGKIARDARESIQEASDKCVKERRKTINDDDIIWSLGTLGFEEYVE
PLKIYLNNYREQYGYLLSIAVQYGV
Nucleotide Sequence
Copy to clipboard
Expand
ATGTCGGAGGTGGAGGCCAACGCCG...
ATGTCGGAGGTGGAGGCCAACGCCGGCGGCGGGGGCAAGGAGCAGGACCGATTCCTCCCTGTCGCCAACATCGGGCGCATCATGCGCCGCGCGGTGCTGGAGAACGGAAAGATCGCTAGGGACGCGAGGGAGTCCATCCAGGAGGCGAGTGACAAGTGCGTCAAGGAGAGGCGAAAGACCATCAACGACGACGACATCATCTGGTCCTTGGGTACGCTCGGCTTCGAGGAATACGTTGAGCCCCTCAAGATCTACCTGAACAATTACCGGGAGCAGTATGGGTACTTGCTTAGCATAGCAGTTCAATATGGAGTTTGA
GRMZM5G859786_T01 from maize genome v3
Amino Acid Sequence
Copy to clipboard
MYQYFMANLISQVFYMPQRTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYVSYMYYTQVNAWFNTFVWPCY
Nucleotide Sequence
Copy to clipboard
Expand
TTGCTGTTGGCATGTACCAATATTT...
TTGCTGTTGGCATGTACCAATATTTCATGGCAAATCTTATATCCCAAGTTTTTTATATGCCGCAGAGGACTAAGTACAACAACATGGAGCCGGATGTTGTTGATTTCTTTGGGGAATGTATGAATAGTCCCCGAAATGGTCGTACTCCGCTTGCAAATGAGATATATGTAAGTTACATGTACTACACTCAAGTAAATGCCTGGTTCAACACTTTTGTATGGCCTTGTTACTAAGTACATTCATTTTATGTAGGAGCAAATGGTTGCAGAGAAGGAAAGAGAGCTAGAAGAAGGAGAAGCACAAAAGTCACCCTCCAGGATTGTTGCTGATAGTCTCAGCCAGATCAGTCGCTCATCCACCTTCCTTCCAAACATTGGTGTCTGTTTGAGTGCTTCAAACCTTTGTGGTGGAACCTTTGTATGTTTGAACCTCTGTTGTGGAAGAACTAGTGTGCTGGAATTGTGTATGACTTGTGATGAGAATGTTGTGTATGATGGCTTTTCATTGTATTATGATTCTGTGAGCTATCATGAGAG
Zm00001d030150_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MYQYFMANLISQVFYMPQRTKYNNMEPDVVDFFGECMNSPRNGRTPLANEIYEQMVAEKERELEEGEAQKSPSRIVADSL
SQISRSSTFLPNIGVCLSASNLCGGTFVCLNLCCGRTSVLELCMTCDENVVYDGFSLYYDS
Nucleotide Sequence
Copy to clipboard
Expand
ACTATGTTGTATTGCTGTTGGCATG...
ACTATGTTGTATTGCTGTTGGCATGTACCAATATTTCATGGCAAATCTTATATCCCAAGTTTTTTATATGCCGCAGAGGACTAAGTACAACAACATGGAGCCGGATGTTGTTGATTTCTTTGGGGAATGTATGAATAGTCCCCGAAATGGTCGTACTCCGCTTGCAAATGAGATATATGAGCAAATGGTTGCAGAGAAGGAAAGAGAGCTAGAAGAAGGAGAAGCACAAAAGTCACCCTCCAGGATTGTTGCTGATAGTCTCAGCCAGATCAGTCGCTCATCCACCTTCCTTCCAAACATTGGTGTCTGTTTGAGTGCTTCAAACCTTTGTGGTGGAACCTTTGTATGTTTGAACCTCTGTTGTGGAAGAACTAGTGTGCTGGAATTGTGTATGACTTGTGATGAGAATGTTGTGTATGATGGCTTTTCATTGTATTATGATTCT
Zm00001d030151_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MAASRVSACRRWRPTPAAGARSRTDSSLSPTSGASCAARASDKCVKERRKTINDDDIIWSLGTLGFEEYVEPLKIYLNNY
RE
Nucleotide Sequence
Copy to clipboard
Expand
ATGGCGGCGTCCAGGGTCTCGGCAT...
ATGGCGGCGTCCAGGGTCTCGGCATGTCGGAGGTGGAGGCCAACGCCGGCGGCGGGGGCAAGGAGCAGGACCGATTCCTCCCTGTCGCCAACATCGGGCGCATCATGCGCCGCGCGGGCGAGTGACAAGTGCGTCAAGGAGAGGCGAAAGACCATCAACGACGACGACATCATCTGGTCCTTGGGTACGCTCGGCTTCGAGGAATACGTTGAGCCCCTCAAGATCTACCTGAACAATTACCGGGAG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26